Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rft1Q8C3B8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Gm12859-201ENSMUST00000117834 427 ntBASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rft1Q8C3B8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.65□□□□□ -0.55
Rft1Q8C3B8 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rft1Q8C3B8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms