Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp43Q8BUM9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.19□□□□□ -0.3
Usp43Q8BUM9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Gm11478-201ENSMUST00000117851 599 ntBASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Gm13369-201ENSMUST00000119442 987 ntBASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.18□□□□□ -0.3
Usp43Q8BUM9 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp43Q8BUM9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp43Q8BUM9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Usp43Q8BUM9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms