Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.39□□□□□ -0.43
Cdk5rap1Q8BTW8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap1Q8BTW8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap1Q8BTW8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap1Q8BTW8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdk5rap1Q8BTW8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm6222-202ENSMUST00000182143 629 ntBASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Mir6420-201ENSMUST00000185032 102 ntBASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdk5rap1Q8BTW8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Mir1247-201ENSMUST00000116706 82 ntBASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Gm6023-201ENSMUST00000118217 606 ntBASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Olfr582-201ENSMUST00000098212 960 ntBASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdk5rap1Q8BTW8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap1Q8BTW8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms