Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Snord83b-201ENSMUST00000104546 94 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm14704-201ENSMUST00000120300 874 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm8062-201ENSMUST00000139696 444 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm32025-201ENSMUST00000217960 307 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup54Q8BTS4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Gm12291-201ENSMUST00000121627 311 ntBASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Gm6222-202ENSMUST00000182143 629 ntBASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup54Q8BTS4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Gm11591-201ENSMUST00000120063 702 ntBASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nup54Q8BTS4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms