Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smg1Q8BKX6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gm13549-201ENSMUST00000118339 796 ntBASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gm12501-201ENSMUST00000119163 529 ntBASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.71□□□□□ -0.69
Smg1Q8BKX6 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gm14644-201ENSMUST00000116671 647 ntBASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Smg1Q8BKX6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Gm13736-201ENSMUST00000119272 253 ntBASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Mir1956-201ENSMUST00000157748 65 ntBASIC10.71□□□□□ -0.7
Smg1Q8BKX6 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smg1Q8BKX6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm27530-201ENSMUST00000184096 98 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms