Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Gm14921-201ENSMUST00000118643 908 ntBASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Gm13813-201ENSMUST00000120998 787 ntBASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Snora78-201ENSMUST00000158630 128 ntBASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Gm14127-201ENSMUST00000117906 678 ntBASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Gm27514-201ENSMUST00000183692 110 ntBASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Mir7085-201ENSMUST00000184353 66 ntBASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Mir339-201ENSMUST00000083659 96 ntBASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Atg4dQ8BGV9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Atg4dQ8BGV9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms