Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm12203-201ENSMUST00000118235 598 ntBASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm12209-201ENSMUST00000120089 596 ntBASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm28693-202ENSMUST00000190758 331 ntBASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm37922-201ENSMUST00000195596 455 ntBASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atg4bQ8BGE6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atg4bQ8BGE6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm13369-201ENSMUST00000119442 987 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm22331-201ENSMUST00000158066 136 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm27847-201ENSMUST00000183711 107 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm5745-201ENSMUST00000183748 313 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm27375-201ENSMUST00000183799 107 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm7561-201ENSMUST00000211203 886 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Atg4bQ8BGE6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atg4bQ8BGE6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms