Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Usp8Q80U87 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Gm20949-201ENSMUST00000206478 952 ntBASIC13.09□□□□□ -0.31
Usp8Q80U87 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Usp8Q80U87 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
Usp8Q80U87 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Usp8Q80U87 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Syt7-205ENSMUST00000224135 1557 ntBASIC13.08□□□□□ -0.32
Usp8Q80U87 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Matn2-203ENSMUST00000226766 3252 ntBASIC13.08□□□□□ -0.32
Usp8Q80U87 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp8Q80U87 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Gm5354-201ENSMUST00000182417 973 ntBASIC13.08□□□□□ -0.32
Usp8Q80U87 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.08□□□□□ -0.32
Usp8Q80U87 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.08□□□□□ -0.32
Usp8Q80U87 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.08□□□□□ -0.32
Usp8Q80U87 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.08□□□□□ -0.32
Usp8Q80U87 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.08□□□□□ -0.32
Usp8Q80U87 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp8Q80U87 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Usp8Q80U87 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Usp8Q80U87 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Usp8Q80U87 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp8Q80U87 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.07□□□□□ -0.32
Usp8Q80U87 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp8Q80U87 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp8Q80U87 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms