Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Gm20426-201ENSMUST00000173657 440 ntBASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Gm44100-201ENSMUST00000204329 436 ntBASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Snrnp40Q6PE01 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms