Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Gm27731-201ENSMUST00000185192 107 ntBASIC12.83□□□□□ -0.36
VclQ64727 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.83□□□□□ -0.36
VclQ64727 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
VclQ64727 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.83□□□□□ -0.36
VclQ64727 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.83□□□□□ -0.36
VclQ64727 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VclQ64727 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.82□□□□□ -0.36
VclQ64727 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.82□□□□□ -0.36
VclQ64727 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
VclQ64727 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.82□□□□□ -0.36
VclQ64727 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.82□□□□□ -0.36
VclQ64727 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
VclQ64727 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VclQ64727 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VclQ64727 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
VclQ64727 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.81□□□□□ -0.36
VclQ64727 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.81□□□□□ -0.36
VclQ64727 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.81□□□□□ -0.36
VclQ64727 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.81□□□□□ -0.36
VclQ64727 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms