Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Gm25109-201ENSMUST00000122474 114 ntBASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Gm27838-201ENSMUST00000184829 128 ntBASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Mir6977-201ENSMUST00000184960 64 ntBASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.15
Tsr1Q5SWD9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tsr1Q5SWD9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Gm14719-201ENSMUST00000121891 340 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Gm15487-201ENSMUST00000122373 465 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Gm40332-201ENSMUST00000199847 938 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
Tsr1Q5SWD9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm9440-201ENSMUST00000119667 539 ntBASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm8927-201ENSMUST00000181978 981 ntBASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm6916-202ENSMUST00000205523 195 ntBASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.13□□□□□ -0.15
Tsr1Q5SWD9 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms