Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm15240-201ENSMUST00000118156 720 ntBASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm15467-201ENSMUST00000120582 445 ntBASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm28630-201ENSMUST00000187806 498 ntBASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms