Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm45925-201ENSMUST00000218882 744 ntBASIC12.57□□□□□ -0.4
Vps13aQ5H8C4 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps13aQ5H8C4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vps13aQ5H8C4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm13492-201ENSMUST00000119772 665 ntBASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vps13aQ5H8C4 Grk6-205ENSMUST00000224653 2976 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm4726-201ENSMUST00000135604 736 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm6019-201ENSMUST00000148369 736 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm270-201ENSMUST00000223010 976 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Gm13549-201ENSMUST00000118339 796 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.55□□□□□ -0.4
Vps13aQ5H8C4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps13aQ5H8C4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms