Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim40Q3UWA4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm6415-201ENSMUST00000118488 348 ntBASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm4804-201ENSMUST00000182234 999 ntBASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Gm5779-201ENSMUST00000218467 910 ntBASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Trim40Q3UWA4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim40Q3UWA4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Gm14822-201ENSMUST00000122247 291 ntBASIC12.2□□□□□ -0.46
Trim40Q3UWA4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Gm9229-201ENSMUST00000222777 126 ntBASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim40Q3UWA4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim40Q3UWA4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms