Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Q3KNL4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.8□□□□□ -0.36
Q3KNL4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Q3KNL4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.8□□□□□ -0.36
Q3KNL4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.8□□□□□ -0.36
Q3KNL4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Q3KNL4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.8□□□□□ -0.36
Q3KNL4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Q3KNL4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Q3KNL4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Q3KNL4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.79□□□□□ -0.36
Q3KNL4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.79□□□□□ -0.36
Q3KNL4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Gm15920-201ENSMUST00000118998 402 ntBASIC12.79□□□□□ -0.36
Q3KNL4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.79□□□□□ -0.36
Q3KNL4 Gm5354-201ENSMUST00000182417 973 ntBASIC12.79□□□□□ -0.36
Q3KNL4 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.79□□□□□ -0.36
Q3KNL4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Q3KNL4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.79□□□□□ -0.36
Q3KNL4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.79□□□□□ -0.36
Q3KNL4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Q3KNL4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3KNL4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.79□□□□□ -0.36
Q3KNL4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.79□□□□□ -0.36
Q3KNL4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Q3KNL4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.78□□□□□ -0.36
Q3KNL4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.78□□□□□ -0.36
Q3KNL4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.78□□□□□ -0.36
Q3KNL4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.78□□□□□ -0.36
Q3KNL4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Gm14057-201ENSMUST00000120631 482 ntBASIC12.78□□□□□ -0.36
Q3KNL4 Gm15321-201ENSMUST00000121290 288 ntBASIC12.78□□□□□ -0.36
Q3KNL4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.78□□□□□ -0.36
Q3KNL4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Q3KNL4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Mir7023-201ENSMUST00000185093 64 ntBASIC12.78□□□□□ -0.36
Q3KNL4 Gm38223-201ENSMUST00000194484 695 ntBASIC12.78□□□□□ -0.36
Q3KNL4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.78□□□□□ -0.36
Q3KNL4 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.78□□□□□ -0.36
Q3KNL4 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.78□□□□□ -0.36
Q3KNL4 Gm26315-201ENSMUST00000083890 321 ntBASIC12.78□□□□□ -0.36
Q3KNL4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms