Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.05□□□□□ -0.48
MitfQ08874 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.05□□□□□ -0.48
MitfQ08874 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.05□□□□□ -0.48
MitfQ08874 Gm15393-201ENSMUST00000120499 219 ntBASIC12.05□□□□□ -0.48
MitfQ08874 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.05□□□□□ -0.48
MitfQ08874 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.05□□□□□ -0.48
MitfQ08874 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.05□□□□□ -0.48
MitfQ08874 Gm4804-201ENSMUST00000182234 999 ntBASIC12.05□□□□□ -0.48
MitfQ08874 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.05□□□□□ -0.48
MitfQ08874 Gm44872-201ENSMUST00000207864 420 ntBASIC12.05□□□□□ -0.48
MitfQ08874 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.05□□□□□ -0.48
MitfQ08874 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
MitfQ08874 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
MitfQ08874 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
MitfQ08874 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.05□□□□□ -0.48
MitfQ08874 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
MitfQ08874 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MitfQ08874 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
MitfQ08874 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.04□□□□□ -0.48
MitfQ08874 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
MitfQ08874 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
MitfQ08874 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
MitfQ08874 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.04□□□□□ -0.48
MitfQ08874 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
MitfQ08874 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.04□□□□□ -0.48
MitfQ08874 Gm9229-201ENSMUST00000222777 126 ntBASIC12.04□□□□□ -0.48
MitfQ08874 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.04□□□□□ -0.48
MitfQ08874 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
MitfQ08874 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
MitfQ08874 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MitfQ08874 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
MitfQ08874 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
MitfQ08874 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Gm12403-201ENSMUST00000121384 959 ntBASIC12.03□□□□□ -0.48
MitfQ08874 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
MitfQ08874 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Gm46209-201ENSMUST00000217912 553 ntBASIC12.03□□□□□ -0.48
MitfQ08874 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
MitfQ08874 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
MitfQ08874 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms