Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ebf1Q07802 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.22□□□□□ -0.29
Ebf1Q07802 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Ebf1Q07802 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm11637-201ENSMUST00000120601 592 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm25668-201ENSMUST00000157700 129 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ebf1Q07802 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ebf1Q07802 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm37489-201ENSMUST00000191883 159 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm21769-201ENSMUST00000211922 111 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.22□□□□□ -0.29
Ebf1Q07802 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ebf1Q07802 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.22□□□□□ -0.29
Ebf1Q07802 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ebf1Q07802 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.21□□□□□ -0.29
Ebf1Q07802 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Gm4986-201ENSMUST00000119731 549 ntBASIC13.21□□□□□ -0.29
Ebf1Q07802 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.21□□□□□ -0.29
Ebf1Q07802 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Mospd4-201ENSMUST00000180618 576 ntBASIC13.21□□□□□ -0.29
Ebf1Q07802 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.21□□□□□ -0.29
Ebf1Q07802 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.21□□□□□ -0.29
Ebf1Q07802 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ebf1Q07802 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.21□□□□□ -0.29
Ebf1Q07802 Mir433-201ENSMUST00000093564 124 ntBASIC13.21□□□□□ -0.29
Ebf1Q07802 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ebf1Q07802 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ebf1Q07802 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf1Q07802 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ebf1Q07802 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ebf1Q07802 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Ebf1Q07802 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Ebf1Q07802 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.21□□□□□ -0.3
Ebf1Q07802 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Gm16202-201ENSMUST00000117532 544 ntBASIC13.2□□□□□ -0.3
Ebf1Q07802 Gm6447-201ENSMUST00000118905 835 ntBASIC13.2□□□□□ -0.3
Ebf1Q07802 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Gm20482-202ENSMUST00000174729 825 ntBASIC13.2□□□□□ -0.3
Ebf1Q07802 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.2□□□□□ -0.3
Ebf1Q07802 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.2□□□□□ -0.3
Ebf1Q07802 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms