Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox4Q06831 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sox4Q06831 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox4Q06831 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Sox4Q06831 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Sox4Q06831 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.81□□□□□ -0.36
Sox4Q06831 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.81□□□□□ -0.36
Sox4Q06831 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.81□□□□□ -0.36
Sox4Q06831 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.81□□□□□ -0.36
Sox4Q06831 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox4Q06831 AY702102-202ENSMUST00000194651 1173 ntBASIC12.81□□□□□ -0.36
Sox4Q06831 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.81□□□□□ -0.36
Sox4Q06831 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.81□□□□□ -0.36
Sox4Q06831 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.81□□□□□ -0.36
Sox4Q06831 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox4Q06831 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.81□□□□□ -0.36
Sox4Q06831 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox4Q06831 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox4Q06831 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox4Q06831 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox4Q06831 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox4Q06831 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sox4Q06831 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Gm11637-201ENSMUST00000120601 592 ntBASIC12.8□□□□□ -0.36
Sox4Q06831 Snora78-201ENSMUST00000158630 128 ntBASIC12.8□□□□□ -0.36
Sox4Q06831 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Gm26927-201ENSMUST00000182385 965 ntBASIC12.8□□□□□ -0.36
Sox4Q06831 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox4Q06831 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox4Q06831 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Sox4Q06831 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.8□□□□□ -0.36
Sox4Q06831 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.8□□□□□ -0.36
Sox4Q06831 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.8□□□□□ -0.36
Sox4Q06831 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.8□□□□□ -0.36
Sox4Q06831 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox4Q06831 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox4Q06831 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox4Q06831 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sox4Q06831 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms