Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GabpaQ00422 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GabpaQ00422 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.73□□□□□ -0.05
GabpaQ00422 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GabpaQ00422 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Daam2-202ENSMUST00000224595 1926 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Mir874-201ENSMUST00000104769 76 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.73□□□□□ -0.05
GabpaQ00422 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.73□□□□□ -0.05
GabpaQ00422 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.73□□□□□ -0.05
GabpaQ00422 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.73□□□□□ -0.05
GabpaQ00422 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.73□□□□□ -0.05
GabpaQ00422 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GabpaQ00422 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.73□□□□□ -0.05
GabpaQ00422 Gm30285-201ENSMUST00000214614 422 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Gm6082-201ENSMUST00000215204 454 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GabpaQ00422 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GabpaQ00422 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GabpaQ00422 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.73□□□□□ -0.05
GabpaQ00422 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
GabpaQ00422 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.73□□□□□ -0.05
GabpaQ00422 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GabpaQ00422 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.72□□□□□ -0.05
GabpaQ00422 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.72□□□□□ -0.05
GabpaQ00422 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.72□□□□□ -0.05
GabpaQ00422 Gm23363-201ENSMUST00000175024 79 ntBASIC14.72□□□□□ -0.05
GabpaQ00422 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.72□□□□□ -0.05
GabpaQ00422 Gm5950-201ENSMUST00000213337 772 ntBASIC14.72□□□□□ -0.05
GabpaQ00422 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.72□□□□□ -0.05
GabpaQ00422 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.72□□□□□ -0.05
GabpaQ00422 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.72□□□□□ -0.05
GabpaQ00422 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.72□□□□□ -0.05
GabpaQ00422 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.72□□□□□ -0.05
GabpaQ00422 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GabpaQ00422 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GabpaQ00422 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GabpaQ00422 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GabpaQ00422 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GabpaQ00422 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GabpaQ00422 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GabpaQ00422 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.71□□□□□ -0.05
GabpaQ00422 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GabpaQ00422 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms