Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.93□□□□□ -0.66
Npas1P97459 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Gm5566-201ENSMUST00000116118 459 ntBASIC10.93□□□□□ -0.66
Npas1P97459 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.93□□□□□ -0.66
Npas1P97459 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.93□□□□□ -0.66
Npas1P97459 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.93□□□□□ -0.66
Npas1P97459 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.93□□□□□ -0.66
Npas1P97459 Gm9824-201ENSMUST00000178707 561 ntBASIC10.93□□□□□ -0.66
Npas1P97459 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Npas1P97459 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.93□□□□□ -0.66
Npas1P97459 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Npas1P97459 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.93□□□□□ -0.66
Npas1P97459 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Npas1P97459 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Daam2-202ENSMUST00000224595 1926 ntBASIC10.93□□□□□ -0.66
Npas1P97459 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.93□□□□□ -0.66
Npas1P97459 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Npas1P97459 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Npas1P97459 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Npas1P97459 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Npas1P97459 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Gm15467-201ENSMUST00000120582 445 ntBASIC10.92□□□□□ -0.66
Npas1P97459 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.92□□□□□ -0.66
Npas1P97459 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.92□□□□□ -0.66
Npas1P97459 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Npas1P97459 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.92□□□□□ -0.66
Npas1P97459 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.92□□□□□ -0.66
Npas1P97459 Gm18206-201ENSMUST00000207027 926 ntBASIC10.92□□□□□ -0.66
Npas1P97459 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.92□□□□□ -0.66
Npas1P97459 Gm16476-201ENSMUST00000221544 139 ntBASIC10.92□□□□□ -0.66
Npas1P97459 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Npas1P97459 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Npas1P97459 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Npas1P97459 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Npas1P97459 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.92□□□□□ -0.66
Npas1P97459 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.92□□□□□ -0.66
Npas1P97459 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Npas1P97459 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Npas1P97459 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.91□□□□□ -0.66
Npas1P97459 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.91□□□□□ -0.66
Npas1P97459 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Npas1P97459 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.91□□□□□ -0.66
Npas1P97459 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Npas1P97459 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.91□□□□□ -0.66
Npas1P97459 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms