Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim43bP86448 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim43bP86448 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim43bP86448 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.41□□□□□ -0.26
Trim43bP86448 Gm12341-201ENSMUST00000119724 503 ntBASIC13.41□□□□□ -0.26
Trim43bP86448 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Mir7654-201ENSMUST00000185082 70 ntBASIC13.41□□□□□ -0.26
Trim43bP86448 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim43bP86448 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Gm18307-201ENSMUST00000206864 949 ntBASIC13.41□□□□□ -0.26
Trim43bP86448 Gm45841-201ENSMUST00000207700 164 ntBASIC13.41□□□□□ -0.26
Trim43bP86448 Gm9908-201ENSMUST00000211534 448 ntBASIC13.41□□□□□ -0.26
Trim43bP86448 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim43bP86448 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim43bP86448 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43bP86448 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43bP86448 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43bP86448 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.41□□□□□ -0.26
Trim43bP86448 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trim43bP86448 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.4□□□□□ -0.26
Trim43bP86448 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim43bP86448 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43bP86448 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim43bP86448 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Trim43bP86448 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43bP86448 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.4□□□□□ -0.26
Trim43bP86448 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43bP86448 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.4□□□□□ -0.26
Trim43bP86448 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim43bP86448 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
Trim43bP86448 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim43bP86448 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.4□□□□□ -0.26
Trim43bP86448 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim43bP86448 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43bP86448 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim43bP86448 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim43bP86448 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim43bP86448 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim43bP86448 Gm15806-201ENSMUST00000120696 955 ntBASIC13.39□□□□□ -0.27
Trim43bP86448 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43bP86448 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43bP86448 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms