Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.1□□□□□ -0.15
CiitaP79621 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CiitaP79621 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CiitaP79621 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 Gm6023-201ENSMUST00000118217 606 ntBASIC14.09□□□□□ -0.15
CiitaP79621 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 Gm8738-201ENSMUST00000172606 329 ntBASIC14.09□□□□□ -0.15
CiitaP79621 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 Gm38092-201ENSMUST00000195600 653 ntBASIC14.09□□□□□ -0.15
CiitaP79621 Gm18935-201ENSMUST00000212692 664 ntBASIC14.09□□□□□ -0.15
CiitaP79621 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CiitaP79621 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CiitaP79621 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.09□□□□□ -0.15
CiitaP79621 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CiitaP79621 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CiitaP79621 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CiitaP79621 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CiitaP79621 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CiitaP79621 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CiitaP79621 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CiitaP79621 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.08□□□□□ -0.16
CiitaP79621 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.08□□□□□ -0.16
CiitaP79621 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.08□□□□□ -0.16
CiitaP79621 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.08□□□□□ -0.16
CiitaP79621 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
CiitaP79621 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CiitaP79621 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.08□□□□□ -0.16
CiitaP79621 Gm7046-201ENSMUST00000221351 977 ntBASIC14.08□□□□□ -0.16
CiitaP79621 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.08□□□□□ -0.16
CiitaP79621 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CiitaP79621 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.08□□□□□ -0.16
CiitaP79621 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.08□□□□□ -0.16
CiitaP79621 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.08□□□□□ -0.16
CiitaP79621 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CiitaP79621 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CiitaP79621 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.07□□□□□ -0.16
CiitaP79621 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.07□□□□□ -0.16
CiitaP79621 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CiitaP79621 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CiitaP79621 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms