Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Msx3P70354 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Msx3P70354 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.38□□□□□ -0.27
Msx3P70354 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Msx3P70354 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Msx3P70354 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Msx3P70354 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.38□□□□□ -0.27
Msx3P70354 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Gm28911-201ENSMUST00000188837 117 ntBASIC13.38□□□□□ -0.27
Msx3P70354 Gm8515-201ENSMUST00000194852 576 ntBASIC13.38□□□□□ -0.27
Msx3P70354 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.38□□□□□ -0.27
Msx3P70354 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.38□□□□□ -0.27
Msx3P70354 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Msx3P70354 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Msx3P70354 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.38□□□□□ -0.27
Msx3P70354 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Msx3P70354 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msx3P70354 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.38□□□□□ -0.27
Msx3P70354 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Msx3P70354 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.37□□□□□ -0.27
Msx3P70354 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Msx3P70354 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Gm13612-201ENSMUST00000119276 390 ntBASIC13.37□□□□□ -0.27
Msx3P70354 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Msx3P70354 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Gm28693-202ENSMUST00000190758 331 ntBASIC13.37□□□□□ -0.27
Msx3P70354 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.37□□□□□ -0.27
Msx3P70354 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.37□□□□□ -0.27
Msx3P70354 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.37□□□□□ -0.27
Msx3P70354 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.37□□□□□ -0.27
Msx3P70354 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.37□□□□□ -0.27
Msx3P70354 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.37□□□□□ -0.27
Msx3P70354 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msx3P70354 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.36□□□□□ -0.27
Msx3P70354 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.36□□□□□ -0.27
Msx3P70354 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.36□□□□□ -0.27
Msx3P70354 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.36□□□□□ -0.27
Msx3P70354 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.36□□□□□ -0.27
Msx3P70354 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Gm11618-201ENSMUST00000117946 267 ntBASIC13.36□□□□□ -0.27
Msx3P70354 Gm12091-201ENSMUST00000146791 830 ntBASIC13.36□□□□□ -0.27
Msx3P70354 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.36□□□□□ -0.27
Msx3P70354 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Gm38671-201ENSMUST00000200573 130 ntBASIC13.36□□□□□ -0.27
Msx3P70354 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.36□□□□□ -0.27
Msx3P70354 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.36□□□□□ -0.27
Msx3P70354 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.36□□□□□ -0.27
Msx3P70354 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.36□□□□□ -0.27
Msx3P70354 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.36□□□□□ -0.27
Msx3P70354 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.36□□□□□ -0.27
Msx3P70354 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msx3P70354 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms