Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Rpl39P62892 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39P62892 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39P62892 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39P62892 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Rpl39P62892 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39P62892 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39P62892 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39P62892 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Rpl39P62892 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39P62892 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Rpl39P62892 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.26□□□□□ -0.93
Rpl39P62892 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.26□□□□□ -0.93
Rpl39P62892 Gm15467-201ENSMUST00000120582 445 ntBASIC9.26□□□□□ -0.93
Rpl39P62892 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.26□□□□□ -0.93
Rpl39P62892 Gm24158-201ENSMUST00000175263 71 ntBASIC9.26□□□□□ -0.93
Rpl39P62892 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Gm5425-201ENSMUST00000214125 459 ntBASIC9.26□□□□□ -0.93
Rpl39P62892 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rpl39P62892 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rpl39P62892 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Rpl39P62892 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.26□□□□□ -0.93
Rpl39P62892 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Rpl39P62892 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Rpl39P62892 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rpl39P62892 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.25□□□□□ -0.93
Rpl39P62892 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.25□□□□□ -0.93
Rpl39P62892 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rpl39P62892 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.25□□□□□ -0.93
Rpl39P62892 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.25□□□□□ -0.93
Rpl39P62892 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Rpl39P62892 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Rpl39P62892 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.25□□□□□ -0.93
Rpl39P62892 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.25□□□□□ -0.93
Rpl39P62892 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rpl39P62892 Gm8410-201ENSMUST00000117225 605 ntBASIC9.25□□□□□ -0.93
Rpl39P62892 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC9.25□□□□□ -0.93
Rpl39P62892 Gm11779-201ENSMUST00000118541 368 ntBASIC9.25□□□□□ -0.93
Rpl39P62892 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms