Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Abcd3P55096 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.66□□□□□ -0.54
Abcd3P55096 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Abcd3P55096 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Abcd3P55096 Mir686-201ENSMUST00000102174 109 ntBASIC11.66□□□□□ -0.54
Abcd3P55096 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.66□□□□□ -0.54
Abcd3P55096 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Gm23984-201ENSMUST00000157139 203 ntBASIC11.66□□□□□ -0.54
Abcd3P55096 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.66□□□□□ -0.54
Abcd3P55096 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.66□□□□□ -0.54
Abcd3P55096 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.66□□□□□ -0.54
Abcd3P55096 Gm6180-201ENSMUST00000065243 498 ntBASIC11.66□□□□□ -0.54
Abcd3P55096 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.66□□□□□ -0.54
Abcd3P55096 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.66□□□□□ -0.54
Abcd3P55096 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Abcd3P55096 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Abcd3P55096 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.66□□□□□ -0.54
Abcd3P55096 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Abcd3P55096 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Abcd3P55096 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Gm13612-201ENSMUST00000119276 390 ntBASIC11.65□□□□□ -0.54
Abcd3P55096 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.65□□□□□ -0.54
Abcd3P55096 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.65□□□□□ -0.54
Abcd3P55096 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.65□□□□□ -0.54
Abcd3P55096 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.65□□□□□ -0.54
Abcd3P55096 Gm8598-201ENSMUST00000221184 836 ntBASIC11.65□□□□□ -0.54
Abcd3P55096 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.65□□□□□ -0.54
Abcd3P55096 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.65□□□□□ -0.54
Abcd3P55096 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.65□□□□□ -0.54
Abcd3P55096 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Abcd3P55096 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.65□□□□□ -0.54
Abcd3P55096 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Abcd3P55096 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Abcd3P55096 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Abcd3P55096 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.55
Abcd3P55096 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abcd3P55096 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.65□□□□□ -0.55
Abcd3P55096 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.65□□□□□ -0.55
Abcd3P55096 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Abcd3P55096 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.64□□□□□ -0.55
Abcd3P55096 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.64□□□□□ -0.55
Abcd3P55096 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.64□□□□□ -0.55
Abcd3P55096 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.64□□□□□ -0.55
Abcd3P55096 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.64□□□□□ -0.55
Abcd3P55096 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Abcd3P55096 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.64□□□□□ -0.55
Abcd3P55096 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.64□□□□□ -0.55
Abcd3P55096 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Gm38671-201ENSMUST00000200573 130 ntBASIC11.64□□□□□ -0.55
Abcd3P55096 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.64□□□□□ -0.55
Abcd3P55096 Gm45384-201ENSMUST00000210451 277 ntBASIC11.64□□□□□ -0.55
Abcd3P55096 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abcd3P55096 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms