Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Rubie-203ENSMUST00000227803 2430 ntBASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm5866-201ENSMUST00000177881 973 ntBASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Gm12341-201ENSMUST00000119724 503 ntBASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1aP25118 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Gm37917-201ENSMUST00000194711 392 ntBASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms