Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Gm13612-201ENSMUST00000119276 390 ntBASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp6P0C0A3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm18187-201ENSMUST00000196476 984 ntBASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp6P0C0A3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.18□□□□□ -0.14
Chmp6P0C0A3 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.18□□□□□ -0.14
Chmp6P0C0A3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms