Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Sod1P08228 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sod1P08228 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sod1P08228 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.17□□□□□ -0.46
Sod1P08228 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sod1P08228 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.16□□□□□ -0.46
Sod1P08228 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sod1P08228 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.16□□□□□ -0.46
Sod1P08228 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Sod1P08228 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sod1P08228 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.16□□□□□ -0.46
Sod1P08228 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.16□□□□□ -0.46
Sod1P08228 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.16□□□□□ -0.46
Sod1P08228 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.16□□□□□ -0.46
Sod1P08228 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.16□□□□□ -0.46
Sod1P08228 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Sod1P08228 Gm44651-201ENSMUST00000207343 372 ntBASIC12.16□□□□□ -0.46
Sod1P08228 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.16□□□□□ -0.46
Sod1P08228 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Sod1P08228 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Gm39404-201ENSMUST00000216350 313 ntBASIC12.16□□□□□ -0.46
Sod1P08228 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Gm8385-201ENSMUST00000058999 643 ntBASIC12.16□□□□□ -0.46
Sod1P08228 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sod1P08228 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Sod1P08228 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sod1P08228 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.16□□□□□ -0.46
Sod1P08228 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.15□□□□□ -0.46
Sod1P08228 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.15□□□□□ -0.46
Sod1P08228 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sod1P08228 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sod1P08228 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sod1P08228 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sod1P08228 Gm13813-201ENSMUST00000120998 787 ntBASIC12.15□□□□□ -0.46
Sod1P08228 Gm12176-201ENSMUST00000121420 875 ntBASIC12.15□□□□□ -0.46
Sod1P08228 Gm12566-201ENSMUST00000121479 359 ntBASIC12.15□□□□□ -0.46
Sod1P08228 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Sod1P08228 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.15□□□□□ -0.46
Sod1P08228 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.15□□□□□ -0.46
Sod1P08228 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.15□□□□□ -0.46
Sod1P08228 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Gm10312-201ENSMUST00000078515 489 ntBASIC12.15□□□□□ -0.46
Sod1P08228 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.15□□□□□ -0.46
Sod1P08228 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sod1P08228 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sod1P08228 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sod1P08228 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sod1P08228 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sod1P08228 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sod1P08228 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Sod1P08228 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.15□□□□□ -0.47
Sod1P08228 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms