Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Itgb3O54890 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Itgb3O54890 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Itgb3O54890 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.8□□□□□ -0.2
Itgb3O54890 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Itgb3O54890 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Itgb3O54890 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Itgb3O54890 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Itgb3O54890 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Itgb3O54890 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Itgb3O54890 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Itgb3O54890 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Itgb3O54890 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Itgb3O54890 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Itgb3O54890 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Itgb3O54890 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Itgb3O54890 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Itgb3O54890 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Itgb3O54890 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Itgb3O54890 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Itgb3O54890 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.79□□□□□ -0.2
Itgb3O54890 Gm14704-201ENSMUST00000120300 874 ntBASIC13.79□□□□□ -0.2
Itgb3O54890 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.79□□□□□ -0.2
Itgb3O54890 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Itgb3O54890 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Itgb3O54890 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Gm7809-201ENSMUST00000153199 742 ntBASIC13.79□□□□□ -0.2
Itgb3O54890 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.79□□□□□ -0.2
Itgb3O54890 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Itgb3O54890 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.79□□□□□ -0.2
Itgb3O54890 Gm32025-201ENSMUST00000217960 307 ntBASIC13.79□□□□□ -0.2
Itgb3O54890 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.79□□□□□ -0.2
Itgb3O54890 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.79□□□□□ -0.2
Itgb3O54890 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.79□□□□□ -0.2
Itgb3O54890 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Itgb3O54890 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.79□□□□□ -0.2
Itgb3O54890 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Itgb3O54890 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Itgb3O54890 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Itgb3O54890 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Itgb3O54890 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Itgb3O54890 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Itgb3O54890 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Snord83b-201ENSMUST00000104546 94 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.78□□□□□ -0.2
Itgb3O54890 Gm43133-201ENSMUST00000197472 463 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Gm6013-201ENSMUST00000212264 699 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.78□□□□□ -0.2
Itgb3O54890 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Itgb3O54890 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Itgb3O54890 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.78□□□□□ -0.2
Itgb3O54890 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.78□□□□□ -0.2
Itgb3O54890 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Itgb3O54890 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Itgb3O54890 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.78□□□□□ -0.2
Itgb3O54890 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Itgb3O54890 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Itgb3O54890 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Itgb3O54890 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms