Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Nr1i3O35627 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.98□□□□□ -0.17
Nr1i3O35627 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.98□□□□□ -0.17
Nr1i3O35627 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gm15823-201ENSMUST00000064305 670 ntBASIC13.98□□□□□ -0.17
Nr1i3O35627 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.98□□□□□ -0.17
Nr1i3O35627 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nr1i3O35627 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.98□□□□□ -0.17
Nr1i3O35627 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.98□□□□□ -0.17
Nr1i3O35627 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nr1i3O35627 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nr1i3O35627 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nr1i3O35627 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.97□□□□□ -0.17
Nr1i3O35627 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Gm7488-201ENSMUST00000117148 684 ntBASIC13.97□□□□□ -0.17
Nr1i3O35627 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.97□□□□□ -0.17
Nr1i3O35627 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.97□□□□□ -0.17
Nr1i3O35627 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.97□□□□□ -0.17
Nr1i3O35627 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Gm2495-201ENSMUST00000191160 466 ntBASIC13.97□□□□□ -0.17
Nr1i3O35627 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.97□□□□□ -0.17
Nr1i3O35627 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.97□□□□□ -0.17
Nr1i3O35627 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.97□□□□□ -0.17
Nr1i3O35627 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nr1i3O35627 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.97□□□□□ -0.17
Nr1i3O35627 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nr1i3O35627 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nr1i3O35627 Gm12859-201ENSMUST00000117834 427 ntBASIC13.96□□□□□ -0.17
Nr1i3O35627 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.96□□□□□ -0.17
Nr1i3O35627 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms