Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.73□□□□□ -0.37
Npc1O35604 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.73□□□□□ -0.37
Npc1O35604 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.73□□□□□ -0.37
Npc1O35604 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.73□□□□□ -0.37
Npc1O35604 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.73□□□□□ -0.37
Npc1O35604 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.73□□□□□ -0.37
Npc1O35604 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.73□□□□□ -0.37
Npc1O35604 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.73□□□□□ -0.37
Npc1O35604 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Npc1O35604 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Npc1O35604 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Npc1O35604 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.72□□□□□ -0.37
Npc1O35604 Gm2231-201ENSMUST00000125661 612 ntBASIC12.72□□□□□ -0.37
Npc1O35604 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 Gm40466-201ENSMUST00000212174 422 ntBASIC12.72□□□□□ -0.37
Npc1O35604 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.72□□□□□ -0.37
Npc1O35604 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.72□□□□□ -0.37
Npc1O35604 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npc1O35604 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.71□□□□□ -0.37
Npc1O35604 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.71□□□□□ -0.37
Npc1O35604 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.71□□□□□ -0.37
Npc1O35604 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Npc1O35604 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.71□□□□□ -0.37
Npc1O35604 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Npc1O35604 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.71□□□□□ -0.37
Npc1O35604 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.71□□□□□ -0.37
Npc1O35604 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms