Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.65■□□□□ 0.74
Polr1aO35134 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC19.65■□□□□ 0.74
Polr1aO35134 Gm24231-201ENSMUST00000104315 133 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC19.65■□□□□ 0.74
Polr1aO35134 Gm7851-201ENSMUST00000117574 323 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 Gm11667-201ENSMUST00000119828 486 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Mir6546-201ENSMUST00000184460 62 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Polr1aO35134 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Polr1aO35134 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Polr1aO35134 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC19.64■□□□□ 0.74
Polr1aO35134 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Polr1aO35134 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Polr1aO35134 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Gm22133-201ENSMUST00000102082 109 ntBASIC19.64■□□□□ 0.73
Polr1aO35134 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC19.64■□□□□ 0.73
Polr1aO35134 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Polr1aO35134 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC19.64■□□□□ 0.73
Polr1aO35134 Gm28071-201ENSMUST00000190355 478 ntBASIC19.64■□□□□ 0.73
Polr1aO35134 AC159819.2-201ENSMUST00000216151 342 ntBASIC19.64■□□□□ 0.73
Polr1aO35134 Gm10371-202ENSMUST00000228010 1081 ntBASIC19.64■□□□□ 0.73
Polr1aO35134 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Polr1aO35134 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Polr1aO35134 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr1aO35134 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC19.64■□□□□ 0.73
Polr1aO35134 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC19.63■□□□□ 0.73
Polr1aO35134 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Polr1aO35134 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Mir680-2-201ENSMUST00000102163 110 ntBASIC19.63■□□□□ 0.73
Polr1aO35134 Gm23251-201ENSMUST00000103773 110 ntBASIC19.63■□□□□ 0.73
Polr1aO35134 Gm13611-201ENSMUST00000118269 318 ntBASIC19.63■□□□□ 0.73
Polr1aO35134 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC19.63■□□□□ 0.73
Polr1aO35134 Gm45219-201ENSMUST00000205602 465 ntBASIC19.63■□□□□ 0.73
Polr1aO35134 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC19.63■□□□□ 0.73
Polr1aO35134 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Gm6580-201ENSMUST00000117504 1357 ntBASIC19.63■□□□□ 0.73
Polr1aO35134 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Polr1aO35134 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Polr1aO35134 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr1aO35134 Il17rd-203ENSMUST00000225146 3366 ntBASIC19.62■□□□□ 0.73
Polr1aO35134 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC19.62■□□□□ 0.73
Polr1aO35134 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Gm43916-201ENSMUST00000205062 967 ntBASIC19.62■□□□□ 0.73
Polr1aO35134 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 AC133602.1-201ENSMUST00000227510 509 ntBASIC19.62■□□□□ 0.73
Polr1aO35134 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Polr1aO35134 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC19.62■□□□□ 0.73
Polr1aO35134 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC19.62■□□□□ 0.73
Polr1aO35134 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Polr1aO35134 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC19.62■□□□□ 0.73
Polr1aO35134 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC19.62■□□□□ 0.73
Polr1aO35134 D9Wsu149-201ENSMUST00000214169 594 ntBASIC19.62■□□□□ 0.73
Polr1aO35134 Gm9826-201ENSMUST00000029124 1299 ntBASIC19.62■□□□□ 0.73
Polr1aO35134 Gm5455-201ENSMUST00000058710 715 ntBASIC19.62■□□□□ 0.73
Polr1aO35134 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr1aO35134 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Polr1aO35134 AC166491.1-201ENSMUST00000227053 2308 ntBASIC19.61■□□□□ 0.73
Polr1aO35134 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms