Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Mir1938-201ENSMUST00000158746 100 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm23363-201ENSMUST00000175024 79 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm38158-201ENSMUST00000194617 339 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Mir339-201ENSMUST00000083659 96 ntBASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdhb9E9Q5G2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Gm38092-201ENSMUST00000195600 653 ntBASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb9E9Q5G2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Gm13813-201ENSMUST00000120998 787 ntBASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Gm8738-201ENSMUST00000172606 329 ntBASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Gm7399-201ENSMUST00000032395 858 ntBASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhb9E9Q5G2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms