Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.61□□□□□ -0.55
Sptbn4E9PX29 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sptbn4E9PX29 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Gm12943-201ENSMUST00000119616 210 ntBASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Gm40879-201ENSMUST00000220759 612 ntBASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Gm807-202ENSMUST00000224929 408 ntBASIC11.6□□□□□ -0.55
Sptbn4E9PX29 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Gm43520-201ENSMUST00000197996 164 ntBASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sptbn4E9PX29 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Gm6905-201ENSMUST00000205729 511 ntBASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sptbn4E9PX29 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms