Protein–RNA interactions for Protein: A0A0G2JGN3

Ighv1-78, Immunoglobulin heavy variable 1-78 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-78A0A0G2JGN3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Mir7085-201ENSMUST00000184353 66 ntBASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm4768-201ENSMUST00000206199 686 ntBASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm17208-201ENSMUST00000168388 535 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm37042-201ENSMUST00000193816 581 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm19163-201ENSMUST00000223313 780 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ighv1-78A0A0G2JGN3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms