Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pfdn5Q9WU28 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Mir874-201ENSMUST00000104769 76 ntBASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pfdn5Q9WU28 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.71□□□□□ -0.7
Pfdn5Q9WU28 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
Pfdn5Q9WU28 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pfdn5Q9WU28 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pfdn5Q9WU28 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pfdn5Q9WU28 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Mir698-201ENSMUST00000102164 109 ntBASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.7□□□□□ -0.7
Pfdn5Q9WU28 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms