Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.71□□□□□ -0.37
Cdh17Q9R100 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.71□□□□□ -0.37
Cdh17Q9R100 Itm2b-204ENSMUST00000228637 783 ntBASIC12.71□□□□□ -0.37
Cdh17Q9R100 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cdh17Q9R100 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cdh17Q9R100 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdh17Q9R100 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.71□□□□□ -0.37
Cdh17Q9R100 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdh17Q9R100 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Mir686-201ENSMUST00000102174 109 ntBASIC12.7□□□□□ -0.38
Cdh17Q9R100 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Gm16202-201ENSMUST00000117532 544 ntBASIC12.7□□□□□ -0.38
Cdh17Q9R100 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.7□□□□□ -0.38
Cdh17Q9R100 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdh17Q9R100 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Gm15429-201ENSMUST00000151268 798 ntBASIC12.69□□□□□ -0.38
Cdh17Q9R100 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.69□□□□□ -0.38
Cdh17Q9R100 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.69□□□□□ -0.38
Cdh17Q9R100 Gm44069-201ENSMUST00000204898 506 ntBASIC12.69□□□□□ -0.38
Cdh17Q9R100 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.69□□□□□ -0.38
Cdh17Q9R100 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh17Q9R100 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms