Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Gm12928-201ENSMUST00000117115 573 ntBASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.97□□□□□ -0.33
Tubb3Q9ERD7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm13689-201ENSMUST00000119360 685 ntBASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Gm8463-201ENSMUST00000208573 613 ntBASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tubb3Q9ERD7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tubb3Q9ERD7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tubb3Q9ERD7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.95□□□□□ -0.34
Tubb3Q9ERD7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tubb3Q9ERD7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Tubb3Q9ERD7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tubb3Q9ERD7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.95□□□□□ -0.34
Tubb3Q9ERD7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tubb3Q9ERD7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tubb3Q9ERD7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms