Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pck2-205ENSMUST00000226352 2784 ntBASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trim13Q9CYB0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Gm15693-201ENSMUST00000120470 637 ntBASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Gm27622-201ENSMUST00000183779 60 ntBASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim13Q9CYB0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Gm8410-201ENSMUST00000117225 605 ntBASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim13Q9CYB0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms