Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Mir7221-201ENSMUST00000184009 72 ntBASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Mir125a-201ENSMUST00000083545 68 ntBASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTRAFQ9CQE8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Gm13884-201ENSMUST00000118103 829 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Gm38225-201ENSMUST00000194001 393 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTRAFQ9CQE8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Gm15770-201ENSMUST00000117498 584 ntBASIC10.56□□□□□ -0.72
RTRAFQ9CQE8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms