Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rpa3Q9CQ71 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Gm10156-201ENSMUST00000122364 462 ntBASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Gm6458-201ENSMUST00000211573 635 ntBASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Gm5035-201ENSMUST00000215581 927 ntBASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa3Q9CQ71 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gm11978-201ENSMUST00000122315 466 ntBASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gm8652-201ENSMUST00000181363 964 ntBASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gm27839-201ENSMUST00000184242 106 ntBASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa3Q9CQ71 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa3Q9CQ71 Gm11803-201ENSMUST00000119966 444 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms