Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.73□□□□□ -0.37
Msh4Q99MT2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.72□□□□□ -0.37
Msh4Q99MT2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.72□□□□□ -0.37
Msh4Q99MT2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Gm17150-201ENSMUST00000165577 381 ntBASIC12.72□□□□□ -0.37
Msh4Q99MT2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.72□□□□□ -0.37
Msh4Q99MT2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msh4Q99MT2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.72□□□□□ -0.37
Msh4Q99MT2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm4984-201ENSMUST00000115987 360 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm38144-201ENSMUST00000192790 465 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm38671-201ENSMUST00000200573 130 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.71□□□□□ -0.37
Msh4Q99MT2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msh4Q99MT2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.71□□□□□ -0.38
Msh4Q99MT2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.71□□□□□ -0.38
Msh4Q99MT2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Msh4Q99MT2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.7□□□□□ -0.38
Msh4Q99MT2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msh4Q99MT2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms