Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.64□□□□□ -0.39
Cstf3Q99LI7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cstf3Q99LI7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Gm6983-201ENSMUST00000214912 628 ntBASIC12.63□□□□□ -0.39
Cstf3Q99LI7 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cstf3Q99LI7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.62□□□□□ -0.39
Cstf3Q99LI7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Mir7654-201ENSMUST00000185082 70 ntBASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Gm44397-201ENSMUST00000195950 113 ntBASIC12.62□□□□□ -0.39
Cstf3Q99LI7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms