Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Gm26927-201ENSMUST00000182385 965 ntBASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha9Q91Y11 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm13829-201ENSMUST00000119600 138 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm12291-201ENSMUST00000121627 311 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm37042-201ENSMUST00000193816 581 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm43433-201ENSMUST00000196573 481 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.85□□□□□ -0.19
Pcdha9Q91Y11 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdha9Q91Y11 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms