Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb8Q91XZ2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Itm2b-204ENSMUST00000228637 783 ntBASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdhb8Q91XZ2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Gm5687-201ENSMUST00000118252 640 ntBASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb8Q91XZ2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb8Q91XZ2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms