Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.9□□□□□ -0.34
Vsx1Q91V10 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Gm11637-201ENSMUST00000120601 592 ntBASIC12.9□□□□□ -0.34
Vsx1Q91V10 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Gm13097-201ENSMUST00000210722 397 ntBASIC12.9□□□□□ -0.34
Vsx1Q91V10 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.9□□□□□ -0.34
Vsx1Q91V10 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.9□□□□□ -0.34
Vsx1Q91V10 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vsx1Q91V10 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.9□□□□□ -0.35
Vsx1Q91V10 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Gm23270-201ENSMUST00000104055 131 ntBASIC12.89□□□□□ -0.35
Vsx1Q91V10 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Gm11331-201ENSMUST00000119764 288 ntBASIC12.89□□□□□ -0.35
Vsx1Q91V10 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.89□□□□□ -0.35
Vsx1Q91V10 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Gm26185-201ENSMUST00000157692 266 ntBASIC12.89□□□□□ -0.35
Vsx1Q91V10 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vsx1Q91V10 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.89□□□□□ -0.35
Vsx1Q91V10 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.89□□□□□ -0.35
Vsx1Q91V10 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx1Q91V10 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm10434-201ENSMUST00000101158 471 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm14130-201ENSMUST00000118417 987 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm6447-201ENSMUST00000118905 835 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm26956-201ENSMUST00000182176 986 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms