Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm13875-201ENSMUST00000120162 282 ntBASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm14017-201ENSMUST00000121934 386 ntBASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm15276-201ENSMUST00000145953 498 ntBASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm18753-201ENSMUST00000201000 566 ntBASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Gm38317-201ENSMUST00000195564 343 ntBASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.62■□□□□ 0.25
Chmp7Q8R1T1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Rps4l-202ENSMUST00000204242 789 ntBASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Gm44967-201ENSMUST00000207047 631 ntBASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp7Q8R1T1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms