Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Gm18624-201ENSMUST00000220966 658 ntBASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cchcr1Q8K2I2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Gm16202-201ENSMUST00000117532 544 ntBASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Gm16372-201ENSMUST00000073088 450 ntBASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.42■□□□□ 0.06
Cchcr1Q8K2I2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Mir6392-201ENSMUST00000184924 108 ntBASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Gm44069-201ENSMUST00000204898 506 ntBASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms