Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Mir7221-201ENSMUST00000184009 72 ntBASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfwd3Q8CIK8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm8213-201ENSMUST00000118191 441 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm10156-201ENSMUST00000122364 462 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm27486-201ENSMUST00000184923 80 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Gm8598-201ENSMUST00000221184 836 ntBASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms