Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.35□□□□□ -0.27
CopaQ8CIE6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CopaQ8CIE6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Gm12742-201ENSMUST00000117326 410 ntBASIC13.34□□□□□ -0.27
CopaQ8CIE6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.34□□□□□ -0.27
CopaQ8CIE6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Gm29649-201ENSMUST00000185649 419 ntBASIC13.34□□□□□ -0.27
CopaQ8CIE6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.34□□□□□ -0.27
CopaQ8CIE6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.34□□□□□ -0.27
CopaQ8CIE6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.34□□□□□ -0.27
CopaQ8CIE6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CopaQ8CIE6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CopaQ8CIE6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CopaQ8CIE6 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.33□□□□□ -0.27
CopaQ8CIE6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CopaQ8CIE6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CopaQ8CIE6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.33□□□□□ -0.28
CopaQ8CIE6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.33□□□□□ -0.28
CopaQ8CIE6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.33□□□□□ -0.28
CopaQ8CIE6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.33□□□□□ -0.28
CopaQ8CIE6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.33□□□□□ -0.28
CopaQ8CIE6 Gm8598-201ENSMUST00000221184 836 ntBASIC13.33□□□□□ -0.28
CopaQ8CIE6 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.33□□□□□ -0.28
CopaQ8CIE6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.33□□□□□ -0.28
CopaQ8CIE6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CopaQ8CIE6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.32□□□□□ -0.28
CopaQ8CIE6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms